AMAZON-PIRE R tutorial

The purpose of the Amazon-PIRE R tutorial is to provide students with the basic tools they will need to examine and to analyze the scientific data they will acquire during the field course in Manaus in 2010. The data analysis skills will be useful long after the PIRE Field Course is over.

We are asking all students, post-docs, and instructors to complete the tutorial in the next 10-12 days, and to communicate the requested exercise to amazonpire@gmail.com as soon as convenient, but definitely before you depart for Manaus.

The goal of the tutorial is to introduce students to the statistical application "R", widely used in ecology and other sciences, finance, etc. It is essential that students attending the PIRE field course have a computer on which R is already installed and running.

The tutorial elements

  1. Set up R and start using it (PDF).
  2. Data analysis exercise (web based)

Useful files

Direct/diffuse data set.; • R-intro (Portuguese); • R-intro (English);

Note on use of Microsoft Excel for data analysis. Most students have used the spreadsheet program Excel from Microsoft for data analysis. It has the apparent advantage that all of its functions are menu driven and file management is completely automatic (hidden from the user). Long experience has has shown that the tools in Excel are not adequate. Its use for analyzing data in previous courses led to frustration and errors. Excel will not be permitted as a data analysis tool in the PIRE field course.